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PKavosh: A New Parallel Approach to Motif Finding

Hassan ketabi, Mohammadreza A. Oskoei

نویسنده (ها)

سمپوزیوم علوم کامپیوتر و مهندسی نرم‌افزار 2013

مربوط به کنفرانس

In networks, motifs are small-connected sub-graphs with higher frequency occurrence than in random networks. It has recently gathered muchattention as a concept to uncover structural design principles of complex biological networks. Finding motifs in a network is a very challenging and time-consuming process. Several algorithms and improvements have been proposed. One of the best-known tools that can find motifs in a complex network is Kavosh. In this paper, we present a parallel version of Kavosh, named PKavosh, which uses parallel sub-graph enumeration for motif finding. Experimental results show excellent scalability on this problem, achieving a speedup of 7 on 8 processors

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